Solution :
To change the ownership of all accounts to the respective user.user :
cd /home
ls -al | grep root
for i in `ls /var/cpanel/users/`; do chown $i:$i /home/$i ; done
for i in `ls /var/cpanel/users/`; do chown -R $i:$i /home/$i/* ; done
Then change the ownership of the individual public_htmls to their respective user.nobody:
for i in `ls /var/cpanel/users/`; do chown $i:nobody /home/$i/public_html ; done
Change the permissions for public_htmls to 750:
for i in `ls /var/cpanel/users/`; do chmod 750 /home/$i/public_html ; done
Fix the permissions for mail to work fine:
/scripts/mailperm
Fix the ownership of /home:
chown root.root /home
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